BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E11LP1|AL430250
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1639 1881 0.0
>3x_Contig1639
Length = 14140
Score = 1881 bits (947), Expect = 0.0
Identities = 957/961 (99%), Gaps = 1/961 (0%)
Strand = Plus / Minus
Query: 1 gatccagcttgatgaaccttaccggagaaaagatgtacctttctatgctcagctaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4058 gatccagcttgatgaaccttaccggagaaaagatgtacctttctatgctcagctaagaat 3999
Query: 61 aatggtcggtgacgaggatgagacgtttgaatatctactgttcgataacgatgtgaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3998 aatggtcggtgacgaggatgagacgtttgaatatctactgttcgataacgatgtgaaagt 3939
Query: 121 gtcactgagtgacaaatttgatcaagctggtctttattgtattaaattcaagacagagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3938 gtcactgagtgacaaatttgatcaagctggtctttattgtattaaattcaagacagagag 3879
Query: 181 tccgattgatatatctactatcagttctctgaaaggtgacggttctattgtgaactgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3878 tccgattgatatatctactatcagttctctgaaaggtgacggttctattgtgaactgtac 3819
Query: 241 atggatatttgacatgcagttgttcgtcgaaactgaagacgttgatcgtttgcaagacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3818 atggatatttgacatgcagttgttcgtcgaaactgaagacgttgatcgtttgcaagacct 3759
Query: 301 tccattgggtagagtattatgtgtcgatactgcaaactatagccagggtaaagactggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3758 tccattgggtagagtattatgtgtcgatactgcaaactatagccagggtaaagactggga 3699
Query: 361 tcatatttatgttccgtttgatcaacaattatgtgactttttgtacaataagtcggataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3698 tcatatttatgttccgtttgatcaacaattatgtgactttttgtacaataagtcggataa 3639
Query: 421 ttcatctgttttcggccagcaaatgcaggatattgaaccagaattaatccaaatactaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3638 ttcatctgttttcggccagcaaatgcaggatattgaaccagaattaatccaaatactaga 3579
Query: 481 tcctggtttcgattttaagcctcttcattcatacatcataaaaggcacatctatttcgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3578 tcctggtttcgattttaagcctcttcattcatacatcataaaaggcacatctatttcgga 3519
Query: 541 aaaaccaatcgattttttcaagccccaagagtacaatgcgacatcaatgcaaaccgtgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3518 aaaaccaatcgattttttcaagccccaagagtacaatgcgacatcaatgcaaaccgtgct 3459
Query: 601 ttgtagttatcagaataaaaaaacattcgtaaacctactggaagataatgatgaggatta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3458 ttgtagttatcagaataaaaaaacattcgtaaacctactggaagataatgatgaggatta 3399
Query: 661 gaagaatatactcgaattctgaattaacaaatgctgtcctgtcgttttttacagacagca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3398 gaagaatatactcgaattctgaattaacaaatgctgtcctgtcgttttttacagacagca 3339
Query: 721 ctgacaaggtaaaaactacacagcagcmactgccacgataatgaccataatatataatgt 780
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3338 ctgacaaggtaaaaactacacagcagcaactgccacgataatgaccataatatataatgt 3279
Query: 781 aatgatactagttttggagtkatgttttaaacatataatatatatcctatgcagtactta 840
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3278 aatgatactagttttggagttatgttttaaacatataatatatatcctatgcagtactta 3219
Query: 841 gtctatattctaattttatcgattaaraggttcgttactgggatgaaaccagtagataat 900
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 3218 gtctatattctaattttatcgattaaaaggttcgttact-ggatgaaaccagtagataat 3160
Query: 901 gcattaaggagattctttcttgaaaaaatatcatatagtaactaaagtgtgaaggataga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3159 gcattaaggagattctttcttgaaaaaatatcatatagtaactaaagtgtgaaggataga 3100
Query: 961 a 961
|
Sbjct: 3099 a 3099
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7421
Number of Sequences: 1807
Number of extensions: 7421
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)